FAVOR - (Functional Annotation of Variants Online Resource)

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What's Newv2025.1

About FAVORannotator Forums Team Terms Newsletter

What's Newv2025.1

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BRCA1

gene with protein product

BRCA1, DNA repair associated

Start position: 43044294End position: 43125363

Gene Level Annotation SNV Summary InDel Summary Single Cell/Tissue Full Tables Genome Browser

Allele Distribution Gencode Comprehensive Category Clinvar Clinical Significance Functional Consequences High Integrative Score ( >= 10)

Annotation

Count

% of Total

APC Protein Function:

Count

836

% of Total

0.0401

APC Protein Function:

836

0.0401

APC Conservation:

Count

2824

% of Total

0.1355

APC Conservation:

2824

0.1355

APC Epigenetics Active:

Count

1572

% of Total

0.0754

APC Epigenetics Active:

1572

0.0754

APC Epigenetics Repressed:

Count

29

% of Total

0.0014

APC Epigenetics Repressed:

29

0.0014

APC Epigenetics Transcription:

Count

3194

% of Total

0.1533

APC Epigenetics Transcription:

3194

0.1533

APC Local Nucleotide Diversity:

Count

2269

% of Total

0.1089

APC Local Nucleotide Diversity:

2269

0.1089

APC Mutation Density:

Count

3204

% of Total

0.1537

APC Mutation Density:

3204

0.1537

APC Transcription Factor:

Count

1350

% of Total

0.0648

APC Transcription Factor:

1350

0.0648

APC Mappability:

Count

1549

% of Total

0.0743

APC Mappability:

1549

0.0743

CADD PHRED:

Count

2547

% of Total

0.1222

CADD PHRED:

2547

0.1222