FAVOR - (Functional Annotation of Variants Online Resource)

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pgBoost Predictions - BRCA1

Variant-gene link predictions using pgBoost and other single-cell ATAC peak-gene linking scores


rs144412026	0.6756	99.7%	2.0000	0.0335	0.1912
rs799908	0.6690	99.7%	2.0000	0.0335	0.1912
rs11656097	0.4811	98.2%	2.0000	0.0114	0.003273
rs2292595	0.4811	98.2%	2.0000	0.0114	0.003273
rs9897853	0.4682	98.0%	2.0000	0.007433	0.006017
rs1135214	0.4360	97.4%	2.0000	0.0310	0.0492
rs4793209	0.4360	97.4%	2.0000	0.0310	0.0492
rs11658754	0.4360	97.4%	2.0000	0.0310	0.0492
rs2037074	0.2888	93.9%	0.3231	0.0279	0.0165
rs79345851	0.2860	93.8%	2.0000	0.0252	0.001370
rs151301078	0.2764	93.5%	0.3231	0.0279	0.0165
rs1960605	0.2754	93.4%	0.3231	0.0279	0.0165
rs140604391	0.2596	92.9%	2.0000	0.0375	N/A
rs79996471	0.2561	92.7%	2.0000	0.0331	0.0401
rs55874139	0.2322	91.5%	2.0000	0.0141	0.0141
rs74252763	0.2027	89.7%	2.0000	0.0515	0.0802
rs71190323	0.2027	89.7%	2.0000	0.0515	0.0802
rs35650293	0.1664	87.1%	0.9234	0.0459	0.0743
rs145865062	0.1625	86.7%	0.9735	0.0567	0.0946
rs4793215	0.1419	84.7%	2.0000	0.0295	0.005842
rs12451738	0.1127	81.0%	2.0000	0.0295	0.005842
rs17600322	0.1080	80.3%	2.0000	0.0271	0.0377
rs141511017	0.1011	79.1%	2.0000	0.0515	0.0802
rs140334356	0.0956	78.1%	2.0000	0.0209	0.0208
rs149043822	0.0947	77.9%	2.0000	0.0515	0.0802

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